PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000667.1_g270.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

E2F/DP

Protein Properties

Length: 470aa MW: 51764.6 Da PI: 4.8768

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000667.1_g270.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.2	2.5e-27	145	210	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+irwkg Pav_sc0000667.1_g270.1.mk 145 RYDSSLGLLTKKFINLIKHAEDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIRWKG 210 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MSGCARAPNR QPTPATAATA GGTQILPPLR RHLAFESTKP QPFPPDNYHR FAGGARRAGD 60 QEPEAIHVRS PQLTRKDNNE AEYSDWTSSP GYTNVVQSPL QTPVSTKGGR INNRSKASKG 120 NRSGPQTPVS NAGSPSPLTP AGSCRYDSSL GLLTKKFINL IKHAEDGILD LNKAAETLEV 180 QKRRIYDITN VLEGIGLIEK KLKNRIRWKG FDASRPGELD GDLSILQAEV ENLSLKERTL 240 DDQIREMQEK LRDLSEDENN RKWLFVTEED IKALPCFHNE TLIAIKAPHG TTLEVPDPDE 300 AVDYPQRRYR IILRSTMGPI DVYLVSQFEE KFEDINGAEP PVSFPIASGS GSNEHPTTEV 360 VTVESSGKEI EPWAQQADQT CSDINASQEF AGGMMKIVPS DVDNDADYWL LSDAEVSITD 420 MWRTDSGVGW NGADILHSDF GVSDVSITRP QTPPSGIAEI PPHAVNFSQR

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MSGCARAPNR QPTPATAATA GGTQILPPLR RHLAFESTKP QPFPPDNYHR FAGGARRAGD  60
QEPEAIHVRS PQLTRKDNNE AEYSDWTSSP GYTNVVQSPL QTPVSTKGGR INNRSKASKG  120
NRSGPQTPVS NAGSPSPLTP AGSCRYDSSL GLLTKKFINL IKHAEDGILD LNKAAETLEV  180
QKRRIYDITN VLEGIGLIEK KLKNRIRWKG FDASRPGELD GDLSILQAEV ENLSLKERTL  240
DDQIREMQEK LRDLSEDENN RKWLFVTEED IKALPCFHNE TLIAIKAPHG TTLEVPDPDE  300
AVDYPQRRYR IILRSTMGPI DVYLVSQFEE KFEDINGAEP PVSFPIASGS GSNEHPTTEV  360
VTVESSGKEI EPWAQQADQT CSDINASQEF AGGMMKIVPS DVDNDADYWL LSDAEVSITD  420
MWRTDSGVGW NGADILHSDF GVSDVSITRP QTPPSGIAEI PPHAVNFSQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	0.0	E2F/DP family protein