![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pav_sc0000659.1_g090.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 285aa MW: 31000.2 Da PI: 6.4513 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.6 | 1.2e-17 | 22 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEdell +++k+ G g+W+t +++ g+ R++k+c++rw +yl Pav_sc0000659.1_g090.1.mk 22 RGPWTPEEDELLSNYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 69 89******************************99************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 285 aa Download sequence |
MQKLNLHKKK GRETISEVGL KRGPWTPEED ELLSNYIKKE GEGRWRTLPK RAGLLRCGKS 60 CRLRWMNYLR PSVKRGQIAP DEEDLILRLH RLLGNRSNTN PSPPPTSEPV AHHHGAAANT 120 DGNNGNIVTN ISNKENGYLV DDQELGTMVH GYANMTSSDH ASAAAMGTLS LRSSSSNHGG 180 ALLGGNEEDD DMNCCADDVF SSFLNSLINE DPFSGQHHLQ QQVLLQNGNN AHNAAGADGS 240 DHHVPLISSG AGATAPSTFG WESAVLMSSA FIQNDHHRVL NDQTE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G13540.1 | 7e-46 | MYB family protein |