PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000652.1_g1180.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 644aa MW: 71467.4 Da PI: 4.4145

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000652.1_g1180.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	32.2	3.1e-10	9	45	1	38
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevd 38 lp GfrF+Ptdeel+++yLk k++g++ e+ +vi+e+d Pav_sc0000652.1_g1180.1.mk 9 LPLGFRFRPTDEELINHYLKLKINGRNSEV-QVIPEID 45 699************************999.8999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 644 aa Download sequence
MAVLSMDSLP LGFRFRPTDE ELINHYLKLK INGRNSEVQV IPEIDGAFVL CRLFHKPEEK 60 ADVLKYDEVE QTGLSPTTTK SSPDETSSDV VQETATSDMQ GEKQSESIMR WWNDKSDNMS 120 PDALPPVPGD SFMASDVEDP GAEETGIQGR LLMEENQLFD EPFSGQIDCK VFSPLQSLIN 180 SDLEHYVGSP FTSDFGNYNN GLHFQDGTCE QDVSFPELLD EFGVNPYESS CEESTSQKNL 240 VVGNETYLSG QSCMLQTTPP GNSCLDGAWD NTDTNIAQHD LERRASGLYN RQFDAEDLLP 300 KTSLGYYQAE AQASLDNQKT RMGNMADNYF PPSALAELFP VSSVNDTFNN GEEFSSSKDS 360 VNHGYDQVGR TRIRIKTRQP QQQSNSENYE TQGTAPRRIR LHMNISTGSV VDSNVRERDD 420 EEEDEVQSTN TDAREAIQQS HTSDEQEKEH AKINNKEELT SRKNSVNYGS DIVGITGIRI 480 KARQPQQPLK SDESVTQGTA PRRIRLQMNP VGDSNVRDST PGKEDEVQST INETRDSTQK 540 IPDSDEHDAA CHLSKLEMNG KIAEDSPAEM VDKSRETAEE APGKLKLRMG RDSSLHSNHT 600 GLSVASKALP KHHGLISTFV ISVGIPLAVT LFIAFSGIWI ASRS

Sequence ? help Back to Top

Protein Sequence Length: 644 aa Download sequence

MAVLSMDSLP LGFRFRPTDE ELINHYLKLK INGRNSEVQV IPEIDGAFVL CRLFHKPEEK  60
ADVLKYDEVE QTGLSPTTTK SSPDETSSDV VQETATSDMQ GEKQSESIMR WWNDKSDNMS  120
PDALPPVPGD SFMASDVEDP GAEETGIQGR LLMEENQLFD EPFSGQIDCK VFSPLQSLIN  180
SDLEHYVGSP FTSDFGNYNN GLHFQDGTCE QDVSFPELLD EFGVNPYESS CEESTSQKNL  240
VVGNETYLSG QSCMLQTTPP GNSCLDGAWD NTDTNIAQHD LERRASGLYN RQFDAEDLLP  300
KTSLGYYQAE AQASLDNQKT RMGNMADNYF PPSALAELFP VSSVNDTFNN GEEFSSSKDS  360
VNHGYDQVGR TRIRIKTRQP QQQSNSENYE TQGTAPRRIR LHMNISTGSV VDSNVRERDD  420
EEEDEVQSTN TDAREAIQQS HTSDEQEKEH AKINNKEELT SRKNSVNYGS DIVGITGIRI  480
KARQPQQPLK SDESVTQGTA PRRIRLQMNP VGDSNVRDST PGKEDEVQST INETRDSTQK  540
IPDSDEHDAA CHLSKLEMNG KIAEDSPAEM VDKSRETAEE APGKLKLRMG RDSSLHSNHT  600
GLSVASKALP KHHGLISTFV ISVGIPLAVT LFIAFSGIWI ASRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.1	1e-30	NAC family protein