PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000631.1_g160.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | YABBY | ||||||||
Protein Properties | Length: 233aa MW: 26037.5 Da PI: 8.1703 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 244.7 | 1.8e-75 | 23 | 196 | 2 | 170 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee....lleelkveeen 81 ++ s s+q+Cyv+CnfC+t+lavsvP +slfk+vtvrCGhC++llsvn++ + ++hl + + ++ l+e+++++ ++ Pav_sc0000631.1_g160.1.mk 23 HLLSPSDQLCYVHCNFCDTVLAVSVPCSSLFKTVTVRCGHCSNLLSVNMRALLLPPPNNQHLPHPFFNTphnlLQEDMRNAPSS 106 56789**********************************************999999*****9998877556556666666555 PP YABBY 82 lksnvekeesastsvsseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfP 164 + ++++ + +++s+ + + +++e+p++p v+rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP Pav_sc0000631.1_g160.1.mk 107 NTLMNHQPNYTNESIMAIRGGGLDHQEMPKPPAaVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFP 190 555544444444444444447778999**999889************************************************* PP YABBY 165 kihfgl 170 +ihfgl Pav_sc0000631.1_g160.1.mk 191 HIHFGL 196 ****97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MSSAAASSTA FNSPDQQQQQ QQHLLSPSDQ LCYVHCNFCD TVLAVSVPCS SLFKTVTVRC 60 GHCSNLLSVN MRALLLPPPN NQHLPHPFFN TPHNLLQEDM RNAPSSNTLM NHQPNYTNES 120 IMAIRGGGLD HQEMPKPPAA VNRPPEKRQR VPSAYNRFIK DEIQRIKAGN PDISHREAFS 180 AAAKNWAHFP HIHFGLMPDQ PVKKTNMRQQ EGEDMLMKDG FFSTPANVGV SPY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 2e-84 | YABBY family protein |