PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000600.1_g560.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bZIP

Protein Properties

Length: 338aa MW: 37409.1 Da PI: 4.4194

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000600.1_g560.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.3	2.2e-10	154	195	4	45
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 +k+ rr +N+ AA rsR+RKk+++ Le k+k Le+e ++L Pav_sc0000600.1_g560.1.mk 154 SKKRRRQLRNKDAAVRSRERKKMYVRDLEMKSKYLEGECRRL 195 6999**********************************9866 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MELEGDVGFL DSENDIIGEI DWDILFDGSN TLEDVLELEN PVVTATDSST PSPSPSSTVE 60 DAPSNSSPDW IGEIETILMK DDDVNGNQVD SDSGEPTNGE YYEKFLADIL VNSPSTDADS 120 NASADSEKEK LDRSPLNDDD DDDAADADAD DPISKKRRRQ LRNKDAAVRS RERKKMYVRD 180 LEMKSKYLEG ECRRLGRLLQ CCYAENHALR LGLQMNNAYG HGNGVLATKQ ESAVLLLELL 240 LLGSLLRCLD IMCLVALPLI LMAGLRNPLN NVAANKDLES VDLRPRGAAS KMFQHSVLQC 300 FSKSRRCKAS RTKMKHSRFP CLLGSYVSFA LPLLMLET

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	156	186	KRRRQLRNKDAAVRSRERKKMYVRDLEMKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G42990.1	4e-10	bZIP family protein