PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000583.1_g390.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 743aa MW: 82632.2 Da PI: 6.2913

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000583.1_g390.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12	0.00039	572	609	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le++++++ Lq Pav_sc0000583.1_g390.1.mk 572 RQLIQDRIKELRELIPNgA------KCSIDSLLERTIKHMLFLQ 609 77899************77......7777779999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 743 aa Download sequence
MGTADLHHVL RSLCFNTEWN YAIFWKLKYR ARMVLTWEDA YYDNCEQHDS SENRCFNKTL 60 DRLHDSHYSH DPLGLAVAKM SYHVYTLGEG IVGQVAVTRK HQWIFADNLF KNNCSPFQYC 120 DGWQSQFSAG IRTIVVVAVP HGVVQLGSLN KVIENVKLLS EIRDVFSTLQ DSPVEQIRNP 180 LQSGVNSSEC LTSISPKGLA SGVITDCLHN LDKATNREES PDVWSSVFPH IGKDSDSSYV 240 FPLPENCLKK AVELANKHGG LESSNLGCLE SAKLHQSKSS IFNSEHCKLV GVELLDRTKC 300 KGESSGCKDT RMASMIYANP LSHGSVQENV NLCDSADLSA TFLNSAAHGR ANADRVVFYQ 360 NEVLQVSEPS DVKFQKDLEN LDFQTESGHM DTSSTSMAFP AGCELHEALG PAFLNKGNYF 420 DWEAEKNGDG ITIEMPEGMK TSQLTSDSCQ EHLLEAVVAN VCHSGNDVKS EKSFCRSMQS 480 LLTTEKYPEP SSHTTHTIDS ENYSIDQPSL IAEDAQQCLS SSGVCGVISP KWFSSPCPSA 540 CSEQLERSSG PSKNNKKRAR PGENSRPRPR DRQLIQDRIK ELRELIPNGA KCSIDSLLER 600 TIKHMLFLQS ITKHADKLNK CADAKLCHKE ASMLGSSNYE RGSSWAVEVG GNLKVCSIMV 660 ENLNKNGQMV VEMMCEECSH FLEIAEAIRS LGLTILKGVT EARSDKTWIC FVVEGQNNRS 720 IHRMDILWSL VQILQPKNPV QQL

Sequence ? help Back to Top

Protein Sequence Length: 743 aa Download sequence

MGTADLHHVL RSLCFNTEWN YAIFWKLKYR ARMVLTWEDA YYDNCEQHDS SENRCFNKTL  60
DRLHDSHYSH DPLGLAVAKM SYHVYTLGEG IVGQVAVTRK HQWIFADNLF KNNCSPFQYC  120
DGWQSQFSAG IRTIVVVAVP HGVVQLGSLN KVIENVKLLS EIRDVFSTLQ DSPVEQIRNP  180
LQSGVNSSEC LTSISPKGLA SGVITDCLHN LDKATNREES PDVWSSVFPH IGKDSDSSYV  240
FPLPENCLKK AVELANKHGG LESSNLGCLE SAKLHQSKSS IFNSEHCKLV GVELLDRTKC  300
KGESSGCKDT RMASMIYANP LSHGSVQENV NLCDSADLSA TFLNSAAHGR ANADRVVFYQ  360
NEVLQVSEPS DVKFQKDLEN LDFQTESGHM DTSSTSMAFP AGCELHEALG PAFLNKGNYF  420
DWEAEKNGDG ITIEMPEGMK TSQLTSDSCQ EHLLEAVVAN VCHSGNDVKS EKSFCRSMQS  480
LLTTEKYPEP SSHTTHTIDS ENYSIDQPSL IAEDAQQCLS SSGVCGVISP KWFSSPCPSA  540
CSEQLERSSG PSKNNKKRAR PGENSRPRPR DRQLIQDRIK ELRELIPNGA KCSIDSLLER  600
TIKHMLFLQS ITKHADKLNK CADAKLCHKE ASMLGSSNYE RGSSWAVEVG GNLKVCSIMV  660
ENLNKNGQMV VEMMCEECSH FLEIAEAIRS LGLTILKGVT EARSDKTWIC FVVEGQNNRS  720
IHRMDILWSL VQILQPKNPV QQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	0.0	bHLH family protein