PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000575.1_g220.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 266aa MW: 30592.1 Da PI: 9.3066

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000575.1_g220.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.2	2.4e-22	31	118	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 k+Yn YAk++GF vr ++k+s+ +ge+++++fvCsk+g++e++ + ++r+r rtgC akl v k + ++k+ v k+++ Pav_sc0000575.1_g220.1.br 31 KMYNVYAKKAGFGVRCYTTKTSRVTGEVVRKEFVCSKQGHTESKVGR---KKRRRGCVRTGCMAKLAVLKPYeKNKYTVVKFKE 111 68*************************************998766...999999*******999988******* PP FAR1 84 eHnHela 90 eHnHe++ Pav_sc0000575.1_g220.1.br 112 EHNHEMT 118 **986 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MESELEVTPE VSVEFKPQVG LEFDSLEDVL KMYNVYAKKA GFGVRCYTTK TSRVTGEVVR 60 KEFVCSKQGH TESKVGRKKR RRGCVRTGCM AKLAVLKPYE KNKYTVVKFK EEHNHEMTAY 120 DKVHLLRSHR KLTDSTKVYN AHLSEVNISV HQQCINVPCS VEDFEGTHAA VGPSSWLYNE 180 GLAERQSVGS FGKHNRSTSW PWISMLQCSN EVKIFMKLVP MDVNYNISKF ELHWTKILEL 240 EMKLGARELK EEDKGNKARS GRDFHH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	77	103	RKKRRRGCVRTGCMAKLAVLKPYEKNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-14	FAR1 family protein