PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000567.1_g770.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 383aa MW: 42355 Da PI: 8.8739

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000567.1_g770.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.2	6.7e-32	208	263	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs+ AtPk+i+elmkv+gLt+++vkSHLQkYRl+ Pav_sc0000567.1_g770.1.mk 208 KQRRNWSPELHRRFLHALQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLH 263 79****************************************************97 PP
2	Myb_DNA-binding	44.1	4.9e-14	210	261	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r +W++e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ Pav_sc0000567.1_g770.1.mk 210 RRNWSPELHRRFLHALQQLGGShaaTPKQIRELMKvDGLTNDEVKSHLQKYR 261 679***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MESTEKMQAS RLGFRDYVKA LEEERHKIQV FQRELPLCLE LVTQAIERCK QQLSDTTTDY 60 MHGQSECSEQ TSSEGHVFEE FIPLKRISSS DSDDDEVQES QEPKTNDKDK TNGDKKKSDW 120 LRSAQLWNTT PDPPLKEELP RKALVMEVKR NGGAFQPFQR EKSVGKTNGP VAKVPASAPA 180 TSSTTDTVSG GSGESRKKEE KDGQGQRKQR RNWSPELHRR FLHALQQLGG SHAATPKQIR 240 ELMKVDGLTN DEVKSHLQKY RLHTRRPTPT MHNNNNSNSN TQAPQFLVVG GIWVPPQDYA 300 AVAATTASGE AARVAAANGI YAPVATSPST VTPVSPPSLM QRPRPKRPES SHSDERVSHS 360 EGRGHCNSTA TSSSTHTTAS PVL

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MESTEKMQAS RLGFRDYVKA LEEERHKIQV FQRELPLCLE LVTQAIERCK QQLSDTTTDY  60
MHGQSECSEQ TSSEGHVFEE FIPLKRISSS DSDDDEVQES QEPKTNDKDK TNGDKKKSDW  120
LRSAQLWNTT PDPPLKEELP RKALVMEVKR NGGAFQPFQR EKSVGKTNGP VAKVPASAPA  180
TSSTTDTVSG GSGESRKKEE KDGQGQRKQR RNWSPELHRR FLHALQQLGG SHAATPKQIR  240
ELMKVDGLTN DEVKSHLQKY RLHTRRPTPT MHNNNNSNSN TQAPQFLVVG GIWVPPQDYA  300
AVAATTASGE AARVAAANGI YAPVATSPST VTPVSPPSLM QRPRPKRPES SHSDERVSHS  360
EGRGHCNSTA TSSSTHTTAS PVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	1e-89	G2-like family protein