PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000557.1_g980.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 397aa MW: 43922.6 Da PI: 5.0507

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000557.1_g980.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.1	5.8e-31	322	378	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e++ +++++v+itY+g H+h+ Pav_sc0000557.1_g980.1.mk 322 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAIDNTSAVIITYKGIHDHD 378 9*******************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MAEHESFDAL QVEKLKPNEQ EQEEDEEGDE DEDEDEEGKR LGEIQLGELQ NSAPESRETQ 60 LETLAVPSTL ELSENDQCAG FQVNSTSQSI DGAQLQEQLG VSHREILAIV THQDAQMQTQ 120 SPVQLAVYPT PLSELSPTSV TQSIQTQTQS PLQLTVYPTP LSELSPTSVT QSISSAPSPI 180 LLEQKLPSEK IECCDHSGYV TEIVYKSQHT HEPPRKSNCT KESKLALSAE CVRNSITEHP 240 CRTVNDSELS TSSKERIQET PSIPERKRQS PNDSDGNGDV KIKEEHGDVK KSNLEYSTSL 300 LKPGKKPKFV VHAAGDVGIS GDGYRWRKYG QKMVKGNPHP RNYYRCTSAG CPVRKHIETA 360 IDNTSAVIIT YKGIHDHDMP VPKKRHGPPS APLVNRS

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MAEHESFDAL QVEKLKPNEQ EQEEDEEGDE DEDEDEEGKR LGEIQLGELQ NSAPESRETQ  60
LETLAVPSTL ELSENDQCAG FQVNSTSQSI DGAQLQEQLG VSHREILAIV THQDAQMQTQ  120
SPVQLAVYPT PLSELSPTSV TQSIQTQTQS PLQLTVYPTP LSELSPTSVT QSISSAPSPI  180
LLEQKLPSEK IECCDHSGYV TEIVYKSQHT HEPPRKSNCT KESKLALSAE CVRNSITEHP  240
CRTVNDSELS TSSKERIQET PSIPERKRQS PNDSDGNGDV KIKEEHGDVK KSNLEYSTSL  300
LKPGKKPKFV VHAAGDVGIS GDGYRWRKYG QKMVKGNPHP RNYYRCTSAG CPVRKHIETA  360
IDNTSAVIIT YKGIHDHDMP VPKKRHGPPS APLVNRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30935.1	2e-76	WRKY family protein