PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000557.1_g1320.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 645aa MW: 70816 Da PI: 5.8249

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000557.1_g1320.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.6	5.6e-28	161	214	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W++eLH +Fv av+qL G ekA+Pk+il+lm+v+gLt+e+v+SHLQkYRl Pav_sc0000557.1_g1320.1.mk 161 KPRVVWSKELHGKFVAAVHQL-GLEKAVPKKILDLMNVQGLTRENVASHLQKYRL 214 79*****************.******************************7 PP
2	Myb_DNA-binding	41.4	3.4e-13	163	213	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v av+qlG + +k+I m+ +g+t++++ s++qky+ Pav_sc0000557.1_g1320.1.mk 163 RVVWSKELHGKFVAAVHQLGLEkaVPKKILDLMNvQGLTRENVASHLQKYR 213 678***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 645 aa Download sequence
MTVKAQRGGL VDEDGAMDRF PVGMRVLAVD DNPICLRLLE GLLRNCQYQV LSGHSDKELV 60 MKGISHGACD YLLKPVRREE LTNIWQHVIR RKKFDSKDQN KSSSQDKACH ETGEGGQGVS 120 PAGSSDQNGK FNRKRKDQNE DEEEDYEDDE HENEDPSNQK KPRVVWSKEL HGKFVAAVHQ 180 LGLEKAVPKK ILDLMNVQGL TRENVASHLQ KYRLCLKRLS STATQQASMV AAFGGNDSSY 240 MRMGALDGYG DLRSLAGSRR LSNATLSPYT PGGMLGRLNS PAGLSIRGIT SSGLVQPGHS 300 QNLSNSISNL VKLQPALPAN QSPNLYESIP TSLELNQLQQ GKHTAHIGES NPNNDPTSYS 360 VPSSFPDTSV SVSSIHSDSI TSSNPLILHR NPQQALGMGV FGNRSSLSLA SLNPESFDIG 420 IFSNFLDDNR CSESWQVAVQ LSKFPSNDLP MREPFDHGQL HANNLGLSST GPQIGNSPND 480 FSSLSVLPGP AEELRGNMWN QEGLIGDVVP TMDCTSKQRW EEHKRDYNHN LNPTFSATNP 540 TVSANVIVSP LSQSLDQSDA VCSKKMNSSL FDQLNGATPT VMQLSEVEKS AMGTKMKPSE 600 DYLWEQTKSH DGLVQNSYES LNDIMGAIMK GEQNENMLMD GEFWI

Sequence ? help Back to Top

Protein Sequence Length: 645 aa Download sequence

MTVKAQRGGL VDEDGAMDRF PVGMRVLAVD DNPICLRLLE GLLRNCQYQV LSGHSDKELV  60
MKGISHGACD YLLKPVRREE LTNIWQHVIR RKKFDSKDQN KSSSQDKACH ETGEGGQGVS  120
PAGSSDQNGK FNRKRKDQNE DEEEDYEDDE HENEDPSNQK KPRVVWSKEL HGKFVAAVHQ  180
LGLEKAVPKK ILDLMNVQGL TRENVASHLQ KYRLCLKRLS STATQQASMV AAFGGNDSSY  240
MRMGALDGYG DLRSLAGSRR LSNATLSPYT PGGMLGRLNS PAGLSIRGIT SSGLVQPGHS  300
QNLSNSISNL VKLQPALPAN QSPNLYESIP TSLELNQLQQ GKHTAHIGES NPNNDPTSYS  360
VPSSFPDTSV SVSSIHSDSI TSSNPLILHR NPQQALGMGV FGNRSSLSLA SLNPESFDIG  420
IFSNFLDDNR CSESWQVAVQ LSKFPSNDLP MREPFDHGQL HANNLGLSST GPQIGNSPND  480
FSSLSVLPGP AEELRGNMWN QEGLIGDVVP TMDCTSKQRW EEHKRDYNHN LNPTFSATNP  540
TVSANVIVSP LSQSLDQSDA VCSKKMNSSL FDQLNGATPT VMQLSEVEKS AMGTKMKPSE  600
DYLWEQTKSH DGLVQNSYES LNDIMGAIMK GEQNENMLMD GEFWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	2e-74	ARR-B family protein