PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000557.1_g1140.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 321aa    MW: 35875.3 Da    PI: 5.4344
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000557.1_g1140.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.15e-0969117155
                         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                 +++kGV   + +g W A+I+       +  r++lg+f ++ +Aa  ++ a++kl+g
  Pav_sc0000557.1_g1140.1.mk  69 KKFKGVVEQP-NGHWGAQIYA------NhERVWLGTFNSEIDAAMGYDSAALKLRG 117
                                 589***8666.8******999......44**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MERIHCFPIW PDLNFSCVIN DTFKKHIMEE GMSSAVSNSG MKMNTVGGVS DSSLAANDST  60
DGACKRVSKK FKGVVEQPNG HWGAQIYANH ERVWLGTFNS EIDAAMGYDS AALKLRGRDC  120
HRNFPWTETT FEEQHFQNQY ATEVVLIMIK DGSYQTKFLE FRRSRSGIES VGADVQFGSL  180
ARVQSSNGKG ELLEDFLFQK ELTPSDVGKL NRLVIPSKYA CTYFPTVSEA IRGKVEIKKD  240
GGRNNDVSCL VENNANSYQY DGVRNDGGMM DLDYKFKVEA VSPNIHEDED GILLADQKKC  300
FRLFGVEISD VDVLSSHSII V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51120.15e-56RAV family protein