PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000554.1_g1250.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 359aa MW: 38801.8 Da PI: 8.5839

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000554.1_g1250.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.7	1.1e-37	75	135	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprC+s ntkfCy+nnyslsqPr+fCk+CrryWt+GGalr vPvGgg+r+nk+s+ Pav_sc0000554.1_g1250.1.mk 75 PETALKCPRCESINTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSK 135 67899*****************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MVFSSVPVYM DPPNWQQQQT NHQQQGGGND QNNHQLPPPP PQEAGCNSEG GGSGSSSIRP 60 GSMSDRARLA KMPQPETALK CPRCESINTK FCYFNNYSLS QPRHFCKTCR RYWTRGGALR 120 SVPVGGGCRR NKRSKGSGGS SRSKSPAAAG NSSSSTVNSS NSCSTSDNII GHLAHPPPHQ 180 LPFLPSLHHL GDYGSGDMIG LNNFGGMNQP ADVEFQQHQF GSDRLTVRPN SGINMINTEH 240 WRSSLLQHQV QQFPNFLANL EPPTSSHGMY QFEGGNVHQN VGLLPMSKPL DSVGPGVAAT 300 QMANVKMEDN NHQALNLSRN FLGSLGNDHH QYWGNNGGGG NAWTDLSGFT TSSSPSHLL

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MVFSSVPVYM DPPNWQQQQT NHQQQGGGND QNNHQLPPPP PQEAGCNSEG GGSGSSSIRP  60
GSMSDRARLA KMPQPETALK CPRCESINTK FCYFNNYSLS QPRHFCKTCR RYWTRGGALR  120
SVPVGGGCRR NKRSKGSGGS SRSKSPAAAG NSSSSTVNSS NSCSTSDNII GHLAHPPPHQ  180
LPFLPSLHHL GDYGSGDMIG LNNFGGMNQP ADVEFQQHQF GSDRLTVRPN SGINMINTEH  240
WRSSLLQHQV QQFPNFLANL EPPTSSHGMY QFEGGNVHQN VGLLPMSKPL DSVGPGVAAT  300
QMANVKMEDN NHQALNLSRN FLGSLGNDHH QYWGNNGGGG NAWTDLSGFT TSSSPSHLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.2	2e-42	Dof family protein