PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000551.1_g070.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | C3H | ||||||||
Protein Properties | Length: 83aa MW: 9350.43 Da PI: 10.481 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 41.3 | 2.5e-13 | 4 | 27 | 2 | 26 |
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 k+e+C++f+r G C++GdrCkF H+ Pav_sc0000551.1_g070.1.mk 4 KREPCKYFQR-GSCQFGDRCKFLHV 27 89********.*************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 83 aa Download sequence |
MPVKREPCKY FQRGSCQFGD RCKFLHVIQQ QQKSNIFGFG SQSGSDQQRK SNPYGFGVQN 60 NSQSKGPADF GSKQSQFKVS SHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75340.1 | 1e-12 | C3H family protein |