PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000502.1_g280.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 123aa MW: 13381.8 Da PI: 10.6024 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.9 | 6.2e-19 | 15 | 65 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s ykGVr++k +g+Wv+eIr+p g ++r++lg+f t+e+Aa+a++ ++ ++g Pav_sc0000502.1_g280.1.mk 15 SSYKGVRQRK-WGKWVSEIREP---GTKTRIWLGSFETPEMAAAAYDVVALHFRG 65 67*******9.**********8...325*********************999987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence |
MGEPNSSNAY GAASSSYKGV RQRKWGKWVS EIREPGTKTR IWLGSFETPE MAAAAYDVVA 60 LHFRGREARL NFPELVNSLP RPASSNAEDI RRAAHEAALR RRSSPAAEAH EAGSSSSNVG 120 PSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71450.1 | 2e-41 | ERF family protein |