PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000492.1_g530.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 181aa    MW: 20268.6 Da    PI: 7.0165
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000492.1_g530.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP37.75.5e-1297133339
                                SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEE CS
                        SBP   3 qvegCeadlseakeyhrrhkvCevhskapvvlvsgle 39 
                                qv  C++dls+ k+yh+rh vC++hsk+p+++v+g+e
  Pav_sc0000492.1_g530.1.mk  97 QVLVCNMDLSSSKDYHKRHIVCDTHSKTPKAIVNGIE 133
                                7889*****************************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MTLVMNESYA DRRLPHHRNP KEFVPLDHLA DLEWCEGESG SKFSSPVNES NSQDSSLIAL  60
KLGRLADSKN GQNGQHSKER STRAGIKGSY SHTPTRQVLV CNMDLSSSKD YHKRHIVCDT  120
HSKTPKAIVN GIEVNVTPSE EKTVDEEPLV FANKQAKNAF TALLESANVH SDWTWEQTIV  180
R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27370.34e-12SBP family protein