PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000491.1_g310.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 321aa MW: 35641.8 Da PI: 7.2218

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000491.1_g310.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	108.6	2.9e-34	166	223	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCts+ C+vkk+vers +dp++v++tYeg+H+h+ Pav_sc0000491.1_g310.1.mk 166 EDGYRWRKYGQKAVKNSPFPRSYYRCTSTACNVKKRVERSFNDPSIVVTTYEGQHTHP 223 8********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MDVKKDVVKM EDNSTNIGCG FSSSPFSGIF DFCEGEKSSS LGFMELLGAG QDFCTNSLFD 60 YLPQTPSMLP SLAPNFPNTS IMAKECSDYS LNQQPATPNS SSISSASSEA LNEEQTDNKG 120 AADQLEEEEH DQPKTKKELK AKKASQKRQR EPRFAFMTKS EVDHLEDGYR WRKYGQKAVK 180 NSPFPRSYYR CTSTACNVKK RVERSFNDPS IVVTTYEGQH THPSPLMPRP TLTASASAQP 240 SISTTFAMPS MPRTLLSHHY QQQLQPFNFC NYVNGGSPTA NASGTGFHRE RRFCTPATGS 300 AMLTDHGLLQ DIVPSHMLKQ E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47260.1	2e-65	WRKY family protein