PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000491.1_g240.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 283aa    MW: 30733.7 Da    PI: 4.287
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000491.1_g240.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.76e-135295855
                        AP2  8 wdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               +++ +grW+A+I   +   g +k+ +lg++ t eeAa+a++ a+ +++g
  Pav_sc0000491.1_g240.1.br 52 YHH-NGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 95
                               566.8******99966...3.6*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MSFSQSESLS ISLPSSTASL SVSTATTTSV PSVGAIRKPK EENVSITLMA MYHHNGRWEA  60
RIGRVFGNKY LYLGTYSTQE EAARAYDIAA IEYRGINAVT NSDLGSYIRW LKPRADDPIA  120
TQEPETVAEP QNMPLMANSY IPTEESFSHT NPFASDYLNS SPPPRKQEVI GSSIPLNSGS  180
KSSSPTALGF VLQSSIFREL VQKNSNFSED ESTDGEETKD QPQVGLGNDD EFGGIFYDGI  240
GDNPFACSSN SDGDNNPWSS ITSTILLNQP TKANASDSLF FFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.23e-24ERF family protein