PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000491.1_g1010.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 618aa MW: 67020.8 Da PI: 6.8789

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000491.1_g1010.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.4	3.9e-30	323	381	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r aed++++++tYeg+H h+ Pav_sc0000491.1_g1010.1.mk 323 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAiGCPVRKQVQRLAEDKTILITTYEGNHSHP 381 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence
MEKQGRRHHI SSKLFHHSVS DCSFNASDDG QLVDATNNTS SSNPSIPIPI PIKQLFRQTK 60 EIKEMDFFSD NKIMNDDADD DEEPRLQPQQ DCNNNPPAVN TGLNLLTLNS GISSTSAGDI 120 HQNSNNKLMT SLQVELERLH EENGELKTML DQMTKSYSQL QAQLLIAMQK QAQNRLREPI 180 KCEANGMLAR QFMDPRLSAA AAIDHVRNPS VAYSSGKTPA DHEAFSSFSP SNLNIEVMST 240 ERDQYKRRLQ TNINCAEDAL DRSSQCLVSP NYTSKSSNPN LLDDDNDEPK SSTDQEQVPV 300 ADQVPFRKAR VSVRARSEAP MISDGCQWRK YGQKMAKGNP CPRAYYRCTM AIGCPVRKQV 360 QRLAEDKTIL ITTYEGNHSH PLPPAATAMA NTTSAAAAML LSGSTTSKEA LQYHHHHLAN 420 SGFFSNSQLP FFASSMATLS ASAPFPTITL DLTQSPMQQF HRIPPPSSST FPLPLHGYPI 480 NHQLMGGLGH PIPAPMYFPP NYKAPPSPAG VSLGGQRSTS THASGMVETV SAAIASDPNF 540 TAALAAAIST IMGAPRPHQG HQESININDG DIANNNAARG VVASTNNSPP SANIGVPPGS 600 LQPGSPQLPQ SCTTFSTN

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence

MEKQGRRHHI SSKLFHHSVS DCSFNASDDG QLVDATNNTS SSNPSIPIPI PIKQLFRQTK  60
EIKEMDFFSD NKIMNDDADD DEEPRLQPQQ DCNNNPPAVN TGLNLLTLNS GISSTSAGDI  120
HQNSNNKLMT SLQVELERLH EENGELKTML DQMTKSYSQL QAQLLIAMQK QAQNRLREPI  180
KCEANGMLAR QFMDPRLSAA AAIDHVRNPS VAYSSGKTPA DHEAFSSFSP SNLNIEVMST  240
ERDQYKRRLQ TNINCAEDAL DRSSQCLVSP NYTSKSSNPN LLDDDNDEPK SSTDQEQVPV  300
ADQVPFRKAR VSVRARSEAP MISDGCQWRK YGQKMAKGNP CPRAYYRCTM AIGCPVRKQV  360
QRLAEDKTIL ITTYEGNHSH PLPPAATAMA NTTSAAAAML LSGSTTSKEA LQYHHHHLAN  420
SGFFSNSQLP FFASSMATLS ASAPFPTITL DLTQSPMQQF HRIPPPSSST FPLPLHGYPI  480
NHQLMGGLGH PIPAPMYFPP NYKAPPSPAG VSLGGQRSTS THASGMVETV SAAIASDPNF  540
TAALAAAIST IMGAPRPHQG HQESININDG DIANNNAARG VVASTNNSPP SANIGVPPGS  600
LQPGSPQLPQ SCTTFSTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01720.1	4e-74	WRKY family protein