PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000488.1_g560.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | G2-like | ||||||||
Protein Properties | Length: 192aa MW: 21868.5 Da PI: 5.1665 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.5 | 5.2e-32 | 103 | 157 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtp LH++Fv+a++qLGG++kAtPk++l+ m+vkg+tl+h+kSHLQkYRl Pav_sc0000488.1_g560.1.mk 103 KPRLRWTPHLHACFVDAINQLGGPHKATPKKLLQKMGVKGITLYHLKSHLQKYRL 157 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 57.2 | 3.8e-18 | 105 | 156 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+ ++ +vda++qlGg+ t+k+ ++mg kg tl+++ks++qky+ Pav_sc0000488.1_g560.1.mk 105 RLRWTPHLHACFVDAINQLGGPhkaTPKKLLQKMGvKGITLYHLKSHLQKYR 156 89*************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MFHRRGGGGG SGVPNHTYNS QLLQAAALQP QEEEEEKERM VGYGFDYFGD DEQDFQGPPT 60 PTVTQSDDSV VVEGEEEDEE EEEEEEDLSH DLQTPSVLSS NFKPRLRWTP HLHACFVDAI 120 NQLGGPHKAT PKKLLQKMGV KGITLYHLKS HLQKYRLGKY SVKEWKEVPE TCKFLIKTSK 180 CKNIPLNEFF CK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13640.1 | 3e-29 | G2-like family protein |