PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000484.1_g730.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 509aa MW: 55246 Da PI: 5.9253

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000484.1_g730.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.2	1e-39	146	206	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s Pav_sc0000484.1_g730.1.mk 146 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSA 206 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MSEAKDPAIK LFGKTIPVPE VPLSSGESVE APEPDPSSGT LVEDTVDQDH ASSSNSSPEV 60 NTNGDREEKE VNNHKDTLGE KPMQTKQEDG IPPLSSEEVT NPDAASRVGV NPKSPVEKEN 120 ATVKDLKTEE EQSETSNSQE KTLKKPDKIL PCPRCNSMDT KFCYYNNYNV NQPRHFCKNC 180 QRYWTAGGTM RNVPVGAGRR KNKNSASHYR HITVSEALPN AQTDVLNGVH HPSVKSNGTV 240 LTFCGDAPLC ESMASVLHLA DKNIQNGTHN GFQKPEGLRI PASYGSGVNG DDHSNRSTVT 300 DSNSKDEACK TGSQEQVMQS YQGFPPQIPC FPGAPWPYPW NSAQWSSPVT PPAFCPPGFP 360 MPYYPAAAYW GCAVQGAWNI PWLPLPSSPN HSAPSSGPNS PTLGKHSRDE STVKQNNSEE 420 EEAPKEKSAE RCLWIPKTLR IDDPGEAARS SIWATLGIKN DKADSLSGGG LFKAFQPKGD 480 QKNHLTEASP VLQANPAALS RSLNFQESS

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MSEAKDPAIK LFGKTIPVPE VPLSSGESVE APEPDPSSGT LVEDTVDQDH ASSSNSSPEV  60
NTNGDREEKE VNNHKDTLGE KPMQTKQEDG IPPLSSEEVT NPDAASRVGV NPKSPVEKEN  120
ATVKDLKTEE EQSETSNSQE KTLKKPDKIL PCPRCNSMDT KFCYYNNYNV NQPRHFCKNC  180
QRYWTAGGTM RNVPVGAGRR KNKNSASHYR HITVSEALPN AQTDVLNGVH HPSVKSNGTV  240
LTFCGDAPLC ESMASVLHLA DKNIQNGTHN GFQKPEGLRI PASYGSGVNG DDHSNRSTVT  300
DSNSKDEACK TGSQEQVMQS YQGFPPQIPC FPGAPWPYPW NSAQWSSPVT PPAFCPPGFP  360
MPYYPAAAYW GCAVQGAWNI PWLPLPSSPN HSAPSSGPNS PTLGKHSRDE STVKQNNSEE  420
EEAPKEKSAE RCLWIPKTLR IDDPGEAARS SIWATLGIKN DKADSLSGGG LFKAFQPKGD  480
QKNHLTEASP VLQANPAALS RSLNFQESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-106	Dof family protein