PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000484.1_g190.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 530aa MW: 58044.2 Da PI: 8.0021

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000484.1_g190.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.3	2.8e-32	239	295	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dD ynWrKYGqK+vkgse+prsYY+Ct+ +Cpvkkkvers +++++ei+Y+g+Hnhe Pav_sc0000484.1_g190.1.mk 239 DDCYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERSP-NGEITEIIYKGQHNHE 295 8**************************************.*************8 PP
2	WRKY	106.6	1.2e-33	416	474	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+agC+v+k+ver+++dpk+v++tYeg+Hnh+ Pav_sc0000484.1_g190.1.mk 416 LDDGYRWRKYGQKVVKGNPHPRSYYKCTYAGCNVRKHVERASTDPKAVITTYEGKHNHD 474 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MAKNQDSERV SVSASPQPQR PVITLPPRPS AEALFSGGSG ASPGPMTLVS SFFPDTYPDS 60 EYRSFSQLLA GAMGSPMGST RPIQFNENPV DGSAQLEGGS ENGGENNSGF KQSRPMNLMV 120 ARSPLFTVPP GLSPSGLLNS PGFFSPTSPF GISHQQALAQ VTALAQSRMH MQAEYQPSSV 180 GAPTEPQAYH PSIMPNEASQ QQTLPSTSDH RSSMRQSSEA SHSDRKYQPS SVATDRPADD 240 CYNWRKYGQK QVKGSEYPRS YYKCTHLNCP VKKKVERSPN GEITEIIYKG QHNHEAPQPK 300 RGKDGGDLNG HLHSQPRPEN GLQRLVGDSN GSSENIASHS MPERHQESTQ AAPGQLPGAS 360 DSEELRDGEI REEGDADEPN PKRRNIDVGA SEVALSHKTV TEPKIIVQTR SEVDLLDDGY 420 RWRKYGQKVV KGNPHPRSYY KCTYAGCNVR KHVERASTDP KAVITTYEGK HNHDVPAARN 480 SSHNTANNNV SQLKPLAVVA EKHPLLKGRE FGNNDQRPVL LQLKEEQIFV

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MAKNQDSERV SVSASPQPQR PVITLPPRPS AEALFSGGSG ASPGPMTLVS SFFPDTYPDS  60
EYRSFSQLLA GAMGSPMGST RPIQFNENPV DGSAQLEGGS ENGGENNSGF KQSRPMNLMV  120
ARSPLFTVPP GLSPSGLLNS PGFFSPTSPF GISHQQALAQ VTALAQSRMH MQAEYQPSSV  180
GAPTEPQAYH PSIMPNEASQ QQTLPSTSDH RSSMRQSSEA SHSDRKYQPS SVATDRPADD  240
CYNWRKYGQK QVKGSEYPRS YYKCTHLNCP VKKKVERSPN GEITEIIYKG QHNHEAPQPK  300
RGKDGGDLNG HLHSQPRPEN GLQRLVGDSN GSSENIASHS MPERHQESTQ AAPGQLPGAS  360
DSEELRDGEI REEGDADEPN PKRRNIDVGA SEVALSHKTV TEPKIIVQTR SEVDLLDDGY  420
RWRKYGQKVV KGNPHPRSYY KCTYAGCNVR KHVERASTDP KAVITTYEGK HNHDVPAARN  480
SSHNTANNNV SQLKPLAVVA EKHPLLKGRE FGNNDQRPVL LQLKEEQIFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-141	WRKY family protein