PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000464.1_g250.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 244aa MW: 28556.1 Da PI: 6.2953 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48 | 3e-15 | 10 | 57 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd+ll ++++ G g W+ ++ + g++R++k+c++rw++yl Pav_sc0000464.1_g250.1.br 10 RGAWTREEDDLLRQCIENQGEGKWHQVPYKAGLNRCRKSCRLRWLNYL 57 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.7 | 7.3e-15 | 63 | 106 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg + ++E +l+++++k+lG++ W++Ia++++ gRt++++k++w++ Pav_sc0000464.1_g250.1.br 63 RGDFMEDEVDLIIRLHKLLGNR-WSLIAQRLP-GRTANDVKNYWNT 106 678889****************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MEGYNLGVRR GAWTREEDDL LRQCIENQGE GKWHQVPYKA GLNRCRKSCR LRWLNYLKPN 60 IKRGDFMEDE VDLIIRLHKL LGNRWSLIAQ RLPGRTANDV KNYWNTRLRT DCCLKKMKDK 120 SQETIKTIIK RPQPRSFTKS SNCLSFKEPI LDDTQLEENF STPSQTSTST RIGSDWWETF 180 LDDKDATERA TGSGLGLDEE LLASFWVDDD MPQWTRTCIN FSEEGLSRGD FSFSMDLWNH 240 SNEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 2e-64 | MYB family protein |