PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000431.1_g240.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 577aa MW: 64594.8 Da PI: 6.791

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000431.1_g240.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	86.9	2e-27	324	378	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH++Fv+aveqL G ++A+P++ilelmk +gLt+++v+SHLQkYR++ Pav_sc0000431.1_g240.1.mk 324 KMKVDWTPELHKKFVQAVEQL-GVDQAIPSRILELMKAEGLTRHNVASHLQKYRMH 378 5689***************.******************************96 PP
2	Myb_DNA-binding	44.7	3.2e-14	327	376	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av+qlG + +++I + m +g+t+ ++ s++qky+ Pav_sc0000431.1_g240.1.mk 327 VDWTPELHKKFVQAVEQLGVDqaIPSRILELMKaEGLTRHNVASHLQKYR 376 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MVCTANDLQE WKDFPKGLKV LLLDEDNSSA AEIKSKLEAM DYIVTTFCNE TEALSAFSSN 60 PQSFQVAIVE VNASNGHGVF QFLETAKDLP TISLPSYCSN HNWRFYTAFP FNHISFIYLT 120 IYFQLGAVEF LRKPLSEDKL RNIWQHVVHK AFNAGGSAIS ESLKPVKESV VSILQIKQET 180 EEQKCKISVE TENVSRVHES DREQSVGSDK YPAPSTPQLK QGSRLLADGD CQDQINCLSE 240 KESGENDSES KSVETTCSNP IDEGTVQMSE PQMARKTVVK EENDSVKGSQ HPHNRNSGND 300 VGGAAENLSK ASAPNNSCKS NRKKMKVDWT PELHKKFVQA VEQLGVDQAI PSRILELMKA 360 EGLTRHNVAS HLQKYRMHKR HILPKEDDRR LPHPRDPIQR SYYPQNQKPI MAFPPYHYNN 420 SLSMAPVYPM WGQPGSQPAG VQMWGSPGYP QWQPSESWHW KPYQGMQADA WGCPVMPPLQ 480 GGYPSYPQHA AGFHAGVVDN GCSMQHNSFD LHPAEEVVDK VVKEAISKPW LPLPLGLKPP 540 STEGVLDELS RQGICNIPPH INIKARHLQH PSAHQPL

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MVCTANDLQE WKDFPKGLKV LLLDEDNSSA AEIKSKLEAM DYIVTTFCNE TEALSAFSSN  60
PQSFQVAIVE VNASNGHGVF QFLETAKDLP TISLPSYCSN HNWRFYTAFP FNHISFIYLT  120
IYFQLGAVEF LRKPLSEDKL RNIWQHVVHK AFNAGGSAIS ESLKPVKESV VSILQIKQET  180
EEQKCKISVE TENVSRVHES DREQSVGSDK YPAPSTPQLK QGSRLLADGD CQDQINCLSE  240
KESGENDSES KSVETTCSNP IDEGTVQMSE PQMARKTVVK EENDSVKGSQ HPHNRNSGND  300
VGGAAENLSK ASAPNNSCKS NRKKMKVDWT PELHKKFVQA VEQLGVDQAI PSRILELMKA  360
EGLTRHNVAS HLQKYRMHKR HILPKEDDRR LPHPRDPIQR SYYPQNQKPI MAFPPYHYNN  420
SLSMAPVYPM WGQPGSQPAG VQMWGSPGYP QWQPSESWHW KPYQGMQADA WGCPVMPPLQ  480
GGYPSYPQHA AGFHAGVVDN GCSMQHNSFD LHPAEEVVDK VVKEAISKPW LPLPLGLKPP  540
STEGVLDELS RQGICNIPPH INIKARHLQH PSAHQPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-130	ARR-B family protein