PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000396.1_g1160.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bZIP

Protein Properties

Length: 447aa MW: 48357.1 Da PI: 6.5149

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000396.1_g1160.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.8	5.6e-14	242	291	3	52
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 ++kr rr+ +NRe+ArrsR+RK+a + eLe + +L eN++L k+l Pav_sc0000396.1_g1160.1.mk 242 DVKRVRRMLSNRESARRSRRRKQAHLSELEAQASQLRVENSSLLKRLTDA 291 689*****************************************998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MDRMFSVEEM SDQLWSSSAP PVNEADDDLS KMNRSASEWA FQRFLQEASP YSPSPSPPQP 60 PPPPSSSSSS THHDQNDVAE IKMINAHHPN PTHAPNNSSN NYNSNNTPSF SLQPPNVPVD 120 SEEYQAFLKT KLNLACAAVA LSRVKGSLAD SQDSAALAGS GSQASDTSHL GSQAPSKGAG 180 YDLSRPHDKN ANAPVGIPSL PATQHRSAVP VRQATSGSSR ELSDDEDIEG ETAMTENMDP 240 ADVKRVRRML SNRESARRSR RRKQAHLSEL EAQASQLRVE NSSLLKRLTD ADRKYNEAAV 300 DNRVLKADIE TLRAKVKMAE ETVKRITGLN MFHAMSEISS IGMSPFDGSP SETSTGAAVP 360 VQDNPNHHFF QPASNNPTPT HDLRVKHDSA DIPSVENVQQ NSAATSADAV GNKMGRTPSL 420 QRVASLEHLQ KRIRGGNPSG PHCNGEQ

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MDRMFSVEEM SDQLWSSSAP PVNEADDDLS KMNRSASEWA FQRFLQEASP YSPSPSPPQP  60
PPPPSSSSSS THHDQNDVAE IKMINAHHPN PTHAPNNSSN NYNSNNTPSF SLQPPNVPVD  120
SEEYQAFLKT KLNLACAAVA LSRVKGSLAD SQDSAALAGS GSQASDTSHL GSQAPSKGAG  180
YDLSRPHDKN ANAPVGIPSL PATQHRSAVP VRQATSGSSR ELSDDEDIEG ETAMTENMDP  240
ADVKRVRRML SNRESARRSR RRKQAHLSEL EAQASQLRVE NSSLLKRLTD ADRKYNEAAV  300
DNRVLKADIE TLRAKVKMAE ETVKRITGLN MFHAMSEISS IGMSPFDGSP SETSTGAAVP  360
VQDNPNHHFF QPASNNPTPT HDLRVKHDSA DIPSVENVQQ NSAATSADAV GNKMGRTPSL  420
QRVASLEHLQ KRIRGGNPSG PHCNGEQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	257	264	RRSRRRKQ
2	259	264	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.1	3e-62	bZIP family protein