PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000381.1_g230.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ERF

Protein Properties

Length: 436aa MW: 48347.1 Da PI: 8.4587

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000381.1_g230.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	63.3	5.1e-20	247	296	3	56
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++GVr+++ +g+WvAeIr p++ r+r++lg+f+taeeAa a++ a+ l+ge Pav_sc0000381.1_g230.1.mk 247 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAIAYDTAAYMLRGE 296 8****9.******955...5***********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MDGKFPKLET FIEKQLPSYF PRMAGDIGSN LFGDPAIWGG SRSKSSLSSE SSSSSTEEFS 60 SSGSNLINNM PGLTKSPFVP VNFLETFPQL SRVQVSDQPP TSPPSLSSNR SKFPNLTLFL 120 QEPNLLDPSS SSSSSSSTQV EVVDSLGKTK GCDEPSMFPY LSIPSFPTPQ VIDQIQRQPG 180 MIEWLKLNQN LASHSSKGFN DYWLSTTKTQ PMKHTARSSR LQQQINQHHK QPHNNLSSAS 240 SSPGKLFRGV RQRHWGKWVA EIRLPRNRTR VWLGTFDTAE EAAIAYDTAA YMLRGEHAHL 300 NFPDLKHQLK ANALKGSTAA LLEAKLQAIS SSQAHQKAIM ESKSSQLASP NKHSADDHDD 360 HKYSNLMINS NFSQNPTRKE WQFGLESKVG SDHQVVIESK KSQQDLVSAD VDAVQLSRMP 420 SLDMDMIWDA LLVSDS

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MDGKFPKLET FIEKQLPSYF PRMAGDIGSN LFGDPAIWGG SRSKSSLSSE SSSSSTEEFS  60
SSGSNLINNM PGLTKSPFVP VNFLETFPQL SRVQVSDQPP TSPPSLSSNR SKFPNLTLFL  120
QEPNLLDPSS SSSSSSSTQV EVVDSLGKTK GCDEPSMFPY LSIPSFPTPQ VIDQIQRQPG  180
MIEWLKLNQN LASHSSKGFN DYWLSTTKTQ PMKHTARSSR LQQQINQHHK QPHNNLSSAS  240
SSPGKLFRGV RQRHWGKWVA EIRLPRNRTR VWLGTFDTAE EAAIAYDTAA YMLRGEHAHL  300
NFPDLKHQLK ANALKGSTAA LLEAKLQAIS SSQAHQKAIM ESKSSQLASP NKHSADDHDD  360
HKYSNLMINS NFSQNPTRKE WQFGLESKVG SDHQVVIESK KSQQDLVSAD VDAVQLSRMP  420
SLDMDMIWDA LLVSDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13620.1	2e-61	ERF family protein