PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000363.1_g460.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GRF

Protein Properties

Length: 390aa MW: 42578.2 Da PI: 8.4964

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000363.1_g460.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.1	4.1e-25	148	192	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+ep rCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e+ Pav_sc0000363.1_g460.1.mk 148 DPEPTRCRRTDGKKWRCSRDVVAGQKYCERHVHRGRNRSRKPVEA 192 79****************************************986 PP
2	QLQ	50.3	7e-18	76	112	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+F+ +Qlq+L+ Q+l+++y++a++ vPpeLlq+i+k Pav_sc0000363.1_g460.1.mk 76 SYFSFSQLQELELQALIFRYMLAGAAVPPELLQPIRK 112 79*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MDFHLKQWRN QQHESEEQHS AKIPKLHLEP HPHSEPSGYA LPLFVPEPNS KMISTLSAFS 60 ESTPASASTR FPKMGSYFSF SQLQELELQA LIFRYMLAGA AVPPELLQPI RKSLLHSPPY 120 FLHHPLQQYP HFQPALLQSG YWGRAAMDPE PTRCRRTDGK KWRCSRDVVA GQKYCERHVH 180 RGRNRSRKPV EATTATAGGG GGGTSDIATN TTTKTSSGGA HFTLSGSSSS PSIDLLHLNQ 240 SSSESKAENM SLFEHRSEVS GSTKSDSHVL RPFFDDWPGK LQELDNARNN AGSMNSATSL 300 SISIRGNSSS DVSLKLSTGN GVETGLQDGH AEREQPQLNW PAGWGTNQMA SMGGPLAEAL 360 RSSSNSNSSP TSVLHQLPRS SASETSFIST

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MDFHLKQWRN QQHESEEQHS AKIPKLHLEP HPHSEPSGYA LPLFVPEPNS KMISTLSAFS  60
ESTPASASTR FPKMGSYFSF SQLQELELQA LIFRYMLAGA AVPPELLQPI RKSLLHSPPY  120
FLHHPLQQYP HFQPALLQSG YWGRAAMDPE PTRCRRTDGK KWRCSRDVVA GQKYCERHVH  180
RGRNRSRKPV EATTATAGGG GGGTSDIATN TTTKTSSGGA HFTLSGSSSS PSIDLLHLNQ  240
SSSESKAENM SLFEHRSEVS GSTKSDSHVL RPFFDDWPGK LQELDNARNN AGSMNSATSL  300
SISIRGNSSS DVSLKLSTGN GVETGLQDGH AEREQPQLNW PAGWGTNQMA SMGGPLAEAL  360
RSSSNSNSSP TSVLHQLPRS SASETSFIST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	1e-82	GRF family protein