PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000363.1_g420.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 205aa MW: 22986.8 Da PI: 5.0252 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.5 | 1.9e-14 | 45 | 95 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 ykGVr+ + g+Wv+e+r p k+ r++lg+f +++Aa+a++ a+++l+ge Pav_sc0000363.1_g420.1.br 45 IYKGVRQ--RCGKWVCELRQP---DqKKSRIWLGTFTCPDMAARAYDVAALALKGE 95 69***86..47******9998...3357*************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MTDFTDDASS SSSSNRVSAQ AHLRSGEFKK RKAGRKKFNE TRHPIYKGVR QRCGKWVCEL 60 RQPDQKKSRI WLGTFTCPDM AARAYDVAAL ALKGESAALN FPHEASTLPR IASTCSVKDL 120 QSAAAEAAEG FFEVEVKASG LKEKEEEPRR EVVYLDEEEL FNMPGLIDSL AEGLILTPPA 180 MQKGFNWNDF DDDMENVVDF SLWND |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 23 | 32 | LRSGEFKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 1e-34 | ERF family protein |