PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000359.1_g490.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 311aa    MW: 33610 Da    PI: 7.7611
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000359.1_g490.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.5e-203787256
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                               +y GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa a+++a+++l+ge
  Pav_sc0000359.1_g490.1.mk 37 RYVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAAIAYDEAARALRGE 87
                               699******.7*********43...36**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MAGPEVLTKT TTATSSPTNN KTMVTKSPST TKTALRRYVG VRQRPSGRWV AEIKDSSQRV  60
RLWLGTYDTP EEAAIAYDEA ARALRGENAR TNFVSPGPAT NPNSSPLVSS VSNGGFMSGS  120
DGRHGGIGGL SFSSLKAKLS KNLQSIMARS SDHNKSSKSR VSDHFTFASI FHFRKYQYQN  180
PINPLIDIKN IEKVVQPSII VPHNEEGSTS TEPSSWESSS ISDCSAEWAH GFRQAGVDSE  240
GSEIGEGNIM DQIMGWIDSP DNQMGSRISV GDDDSEEGSR SKRFKVSSSV MVPPTFSTGS  300
TFNNINGETS N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-17ERF family protein