PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000354.1_g580.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 403aa MW: 44718.9 Da PI: 8.7003

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000354.1_g580.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25.1	3.1e-08	212	253	8	54
HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +Er+RR+ri+++ + Lr l+Pk + K++ +i AveYI +L Pav_sc0000354.1_g580.1.mk 212 AERNRRSRIKDGHFALRALVPKiS------KMDIPAIIGDAVEYIEEL 253 7*******************66......*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MPLYSGIHTE VIISAQPRWL SGHVNASGSN PSQSHDFVGT RVLIPVLSDL IELFSTKNIP 60 ENQKMLELFM APFNNSLKQE PMATPTHDYA NVNLNASASL NEFHVDPLPE ECPEKLLPSL 120 NLANFIPRPQ VFPSSVSRTS SCPILEGSSS GSNPSSEHPL LSSRSRKSKR GDNLLQQQAG 180 LACGSGSVVE KHKAKVTRKT GSGQYQSKNL FAERNRRSRI KDGHFALRAL VPKISKMDIP 240 AIIGDAVEYI EELKKKEKEL QDELREIEEE EDLTKNKADV KILASDIRKE GSICLISTEH 300 KQGSSSFVQK SPTAVQVEVN QIGKRDCLIK LFYEQSRGGF ARLMENMDSL GLQVVDANVT 360 TFDGNVLNIL KVQANRDIQA KKLRDKLIQL TRETNQTVHK GIN

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MPLYSGIHTE VIISAQPRWL SGHVNASGSN PSQSHDFVGT RVLIPVLSDL IELFSTKNIP  60
ENQKMLELFM APFNNSLKQE PMATPTHDYA NVNLNASASL NEFHVDPLPE ECPEKLLPSL  120
NLANFIPRPQ VFPSSVSRTS SCPILEGSSS GSNPSSEHPL LSSRSRKSKR GDNLLQQQAG  180
LACGSGSVVE KHKAKVTRKT GSGQYQSKNL FAERNRRSRI KDGHFALRAL VPKISKMDIP  240
AIIGDAVEYI EELKKKEKEL QDELREIEEE EDLTKNKADV KILASDIRKE GSICLISTEH  300
KQGSSSFVQK SPTAVQVEVN QIGKRDCLIK LFYEQSRGGF ARLMENMDSL GLQVVDANVT  360
TFDGNVLNIL KVQANRDIQA KKLRDKLIQL TRETNQTVHK GIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10610.1	3e-23	bHLH family protein