PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000348.1_g620.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 541aa MW: 61468.1 Da PI: 7.4347 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 48.9 | 1.2e-15 | 21 | 115 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 ffk+ ++ ++++ + l++pk+f+ ++g + +++ l l + sg W+v l r+ +g++++ kGW +F + L+ g +vF + Pav_sc0000348.1_g620.1.mk 21 FFKIILKGNTSSDAKLRIPKNFVMKYGDDLSNPVSLELPSGSGSAWKVDL--RRLDGEVWFDKGWADFSEFYSLDRGHWLVFGY 102 899999999999**************8888899999**************..******************************** PP -SSSEE..EEEEE-S CS B3 85 dgrsefelvvkvfrk 99 +g+s+f v +f++ Pav_sc0000348.1_g620.1.mk 103 QGNSKF--QVCIFDR 115 **9999..9999997 PP | |||||||
2 | B3 | 47 | 4.7e-15 | 242 | 325 | 6 | 94 |
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 +++++ + +l+lp +f + + +k +s +++l+ ++ r+W v+l+y ++gr + +GW +Fv +n+Lk++D++ F+ ++ ++ Pav_sc0000348.1_g620.1.mk 242 MKPSYITGFLLWLPSEFHKLYPIK--NSGEVILRVLDHRTWPVNLKY--GGGRAQFLSGWMDFVCDNNLKVNDVCAFESID-NK 320 5778888899********999877..4559***************55..555544557********************776.44 PP E..EE CS B3 90 felvv 94 ++++ Pav_sc0000348.1_g620.1.mk 321 VKPLF 325 44555 PP | |||||||
3 | B3 | 49.5 | 7.4e-16 | 440 | 521 | 1 | 86 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 ffkv ++ ++ ++++ +p +f+++h +++ + + l+ + r+W vkl +++ gr +++GW +F+++n L gD+++F l Pav_sc0000348.1_g620.1.mk 440 FFKVAMRTSYIHNRNMNVPYTFVKKHLKQT--NNYVFLRVSGARTWCVKL--CQYVGRAKFQGGWPKFARENSLVKGDVCIFVL 519 888988888899999***********6553..44788888888*******..999999************************98 PP -S CS B3 85 dg 86 ++ Pav_sc0000348.1_g620.1.mk 520 VN 521 75 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 541 aa Download sequence |
MASLPQEIDD WPTFSPTTPH FFKIILKGNT SSDAKLRIPK NFVMKYGDDL SNPVSLELPS 60 GSGSAWKVDL RRLDGEVWFD KGWADFSEFY SLDRGHWLVF GYQGNSKFQV CIFDRTCTEI 120 DYPLRKQEME ETDDTDDDFH EDSGDDSVEE QPDDSTCPRK TRKKSSLPCP RPQKKNRTSS 180 RGKDDYPAKL GSGSTSSTRR FEKRTPGFLG GIRPLPESRN AIALQRANAY KSQHPFSVIV 240 AMKPSYITGF LLWLPSEFHK LYPIKNSGEV ILRVLDHRTW PVNLKYGGGR AQFLSGWMDF 300 VCDNNLKVND VCAFESIDNK VKPLFDVVIF PNIEAANCPN EREQTVPEIE ETNEDDDPSD 360 DSSDESGDAD YLSDDSDNDS VEIIENCTPF PRRTKEKSPM PCPQPPKKNK ASSSGKVYFP 420 ASGNATALQR ANAFKSRHPF FKVAMRTSYI HNRNMNVPYT FVKKHLKQTN NYVFLRVSGA 480 RTWCVKLCQY VGRAKFQGGW PKFARENSLV KGDVCIFVLV NSIKPLFDVV FYHTRDSTTT 540 N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 3e-35 | B3 family protein |