PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000323.1_g800.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 318aa MW: 35234.8 Da PI: 7.2871

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000323.1_g800.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	129.4	1e-40	43	104	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 +e+alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGG+lrnvPvGgg+rknk+sss Pav_sc0000323.1_g800.1.mk 43 PEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKACRRYWTKGGTLRNVPVGGGCRKNKRSSS 104 7899******************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MNYMDPSSGQ QHQEMSAHSL DMLVCSKTQQ QQQQQDRKPR PQPEQALKCP RCDSTNTKFC 60 YYNNYSLSQP RYFCKACRRY WTKGGTLRNV PVGGGCRKNK RSSSSSKRSQ DQQPLTPNSN 120 NPLPSLGYDS NDLTLAFARL QRQSCGQLGF DDQDHLSILG NHNNTTSHGD HSILGNHGLN 180 MNATSAAAAP GFLDALRTGF LETHNGNFQN MYYGFGNGSN SSSLGEVENG VCGEMGLHPF 240 EEMTNSTTTA VTVTTMKQEL CNARDHQSES NRVLWGFPWQ LNGDANNNMV SNECDSGRVE 300 SWNGLAPSWH GLLHSPLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28510.1	1e-41	Dof family protein