PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000323.1_g400.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | AP2 | ||||||||
Protein Properties | Length: 219aa MW: 23914.4 Da PI: 5.3669 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 23.2 | 1.8e-07 | 120 | 152 | 18 | 55 |
AP2 18 eIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 e+rd + k+++lg f+ta Aa+a+++a+ k++g Pav_sc0000323.1_g400.1.mk 120 EVRD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 152 5677......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MLDLNLNVVS SGPNEVESCG TQMDESGTSN SSVVNADASS TNDDSCSTRA ARYDAVTTFN 60 FDILKVRGGE DEDDVVVTKE LFPVTGGLSN WPGQGQSSAS SSLVRKNLME LGFDHGGSGE 120 VRDCGKQVYL GGFDTAHAAA RAYDRAAIKF RGVDADINYN LSDYEEDLKQ MKNLTKEEFV 180 HILRRQSTGF SRGSSRYRGV TLHKCGRWEA RMGQFLGKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.2 | 3e-58 | AP2 family protein |