PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000271.1_g210.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | E2F/DP | ||||||||
Protein Properties | Length: 153aa MW: 16602.3 Da PI: 10.4315 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 63.8 | 2.4e-20 | 74 | 121 | 19 | 71 |
E2F_TDP 19 kseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 +s +gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg Pav_sc0000271.1_g210.1.br 74 SSLDGILDLNNAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 121 56679***********...99..****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence |
MRQITKLSLV IGQLLLAEVV TSPLQTPVSS KVGKANKTSR LTKCSRSGPQ TPAFNVGSPS 60 GANLTPAGPC RFDSSLDGIL DLNNAADTLE VQKRRIYDIT NVLEGIGLIE KKLKNRIQWK 120 GLDVSRTGDV DENYPSLQVR KKVNLLLGML MLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22220.3 | 2e-44 | E2F/DP family protein |