PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000259.1_g100.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 697aa MW: 75009.4 Da PI: 7.7998

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000259.1_g100.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	70.8	1.9e-22	287	360	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEE..............EE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkv..............ersaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v +r+aed +++++tYeg+Hnh+ Pav_sc0000259.1_g100.1.mk 287 MNDGCQWRKYGQKIAKGNPCPRAYYRCTIApSCPVRKQVniyapylamntspvQRCAEDMSILITTYEGTHNHP 360 58*************************99**964444444444444489****************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 697 aa Download sequence
MEAALGKSNS HGGSEKEEKR LVLESSSLAD HDDQEAAGSK EDTLLKVGNG RPCQDNNEMK 60 SSSPTQKDLG SSKQISTTSN TKVEPDHSMA STSSSRKEQD YQLESARAEM GEVREENQRL 120 KKYLDRITDE YQTLQMQLYD IQEKANKSKD VTIASTNNIH NHQDEESEMV SLSLGSFSSR 180 PRKGEKNKNR STSSQGKENE SDRESLSLGL DCKYEAPKSS ATTTEVPLLN SSPASSLEEV 240 PKEEAGETWP PKKVLKTARS VEDEVAQQNP VKKARVSVRA RCDTPTMNDG CQWRKYGQKI 300 AKGNPCPRAY YRCTIAPSCP VRKQVNIYAP YLAMNTSPVQ RCAEDMSILI TTYEGTHNHP 360 LPMSATAMAS TTSAAASMLL SGSSSSARSG LNPSVGATTT AAHDLHGYNF YLSDNSKSRF 420 FIPNSSLSSS LPTITLDLTS NPPPPSSSSN ASSHFNKFSS SSNSSHQLYP PTSLNFGSNS 480 ESNTNMSWSN GFHSYGAQLP PYNINNKNQS GSLSSLGIRQ QQQPLQNNVY QNYMHKNNLN 540 PTPPPHPSQG ASPHQFQPDP IAAATKAITA DPSFQSALAA ALSSIISSNS NVGTAGTTGM 600 LGNNNNQAGG GDNINMAQKF KWGDQFAGST TTSSSPYLQT QIGNNSTIGC ASSYLNKTTS 660 ANSQPGSLMF LPPSLPFASA PKSASTSPGD TRDHKSL

Sequence ? help Back to Top

Protein Sequence Length: 697 aa Download sequence

MEAALGKSNS HGGSEKEEKR LVLESSSLAD HDDQEAAGSK EDTLLKVGNG RPCQDNNEMK  60
SSSPTQKDLG SSKQISTTSN TKVEPDHSMA STSSSRKEQD YQLESARAEM GEVREENQRL  120
KKYLDRITDE YQTLQMQLYD IQEKANKSKD VTIASTNNIH NHQDEESEMV SLSLGSFSSR  180
PRKGEKNKNR STSSQGKENE SDRESLSLGL DCKYEAPKSS ATTTEVPLLN SSPASSLEEV  240
PKEEAGETWP PKKVLKTARS VEDEVAQQNP VKKARVSVRA RCDTPTMNDG CQWRKYGQKI  300
AKGNPCPRAY YRCTIAPSCP VRKQVNIYAP YLAMNTSPVQ RCAEDMSILI TTYEGTHNHP  360
LPMSATAMAS TTSAAASMLL SGSSSSARSG LNPSVGATTT AAHDLHGYNF YLSDNSKSRF  420
FIPNSSLSSS LPTITLDLTS NPPPPSSSSN ASSHFNKFSS SSNSSHQLYP PTSLNFGSNS  480
ESNTNMSWSN GFHSYGAQLP PYNINNKNQS GSLSSLGIRQ QQQPLQNNVY QNYMHKNNLN  540
PTPPPHPSQG ASPHQFQPDP IAAATKAITA DPSFQSALAA ALSSIISSNS NVGTAGTTGM  600
LGNNNNQAGG GDNINMAQKF KWGDQFAGST TTSSSPYLQT QIGNNSTIGC ASSYLNKTTS  660
ANSQPGSLMF LPPSLPFASA PKSASTSPGD TRDHKSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	2e-62	WRKY family protein