PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000257.1_g1260.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 238aa MW: 26073.3 Da PI: 7.8939 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.8 | 1.9e-13 | 47 | 93 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN +++Lr+llP+ ++ +Ka+ L ++v+++++L Pav_sc0000257.1_g1260.1.mk 47 KSHKEAERRRRQRINAHLSTLRTLLPNT-----TRTDKASLLAEVVQHVREL 93 79*************************9.....8***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MLPFLSWSDQ NHYAHDPSLV NLMDGADSIL SPAASMTETS RSAEASKSHK EAERRRRQRI 60 NAHLSTLRTL LPNTTRTDKA SLLAEVVQHV RELRRQAADL ARQDGGSCCG GTTGSEPWPF 120 PGESDEATVS YCDGEARLLK ATLCCEDRPG LNRDLIQAIR SVRATAIRAE MMTVGGRTKN 180 VIVMQWAGGG GEEEVRALKR ALKAVVENRA SGSGPGRLFL GNKQARVYGS IYEDENEY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56770.1 | 4e-29 | bHLH family protein |