PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000241.1_g200.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 231aa    MW: 25134.9 Da    PI: 7.8446
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000241.1_g200.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.77.9e-203180255
                        AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               +y+GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa++ l+g
  Pav_sc0000241.1_g200.1.mk 31 RYRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARILRG 80
                               69*******.**********883....5***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MRRGRGAAAR AAAATPAEPA GSRPNIANEV RYRGVRKRPW GRFAAEIRDP WKKTRVWLGT  60
FDSAEDAARA YDAAARILRG PKAKTNFPIS CAYPPPFYNN PTDQAIETKL FGSGYGFQDH  120
PVVDPQRPTS SSLSSTVESF SGPRQPLQST TIAAESSRRT RQPRTPPVVP EDCHSDCDSS  180
SSVVEDDGDF AASSSFRKPL LPFDLNFPPF DEEGELGGGD GQDLRCTALC L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.18e-26ERF family protein