PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000220.1_g610.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 516aa MW: 56174.7 Da PI: 7.7222

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000220.1_g610.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	107.9	5.1e-34	240	296	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers d++++ei+Y+geHnhe Pav_sc0000220.1_g610.1.mk 240 DDGYNWRKYGQKQVKGSEFPRSYYKCTHSNCPVKKKVERSI-DGQITEIIYKGEHNHE 296 8**************************************.*************8 PP
2	WRKY	107.5	6.6e-34	405	463	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++ C+v+k+ver+++dpk+v++tYeg+Hnh+ Pav_sc0000220.1_g610.1.mk 405 LDDGYRWRKYGQKVVKGNPYPRSYYKCTFPACNVRKHVERASTDPKAVITTYEGKHNHD 463 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence
MAENREQPPG PPPSTSSSPL KSAAPPPPPP RPTITLPPRT SFETLFNSGG ANSGPGFGLG 60 FSPGPMTLVS SFLSDGDDCK SFSQLLAGAM SPAARPPGFP QLEDRSSGDG DDNSDFRFKH 120 NRPSPMFSVP SPGLLDSPRL FSPGQGPFGM THQQALAQVT AQAAQSSSYF HIPTEYSSSL 180 STAPTTSLTQ LPAFTSDSTA PQEMPSGAAD SGVAIKESSD ISHSDQRSQP SSFTVDKPND 240 DGYNWRKYGQ KQVKGSEFPR SYYKCTHSNC PVKKKVERSI DGQITEIIYK GEHNHERPQS 300 KRAKDSGNPI GNIQANPDLA SQVHGGHLNK SKKGQESSQA THDHLSGTSD GEEVGDAETR 360 VDEKDEDQPD PKRRNTEVRS EPASSHRTVT EPRIIVQTTS EVDLLDDGYR WRKYGQKVVK 420 GNPYPRSYYK CTFPACNVRK HVERASTDPK AVITTYEGKH NHDVPASKTG SHYAANNNAS 480 NIRAVDAGTE KINKMDLRNS DQQRVARLRL KEEQLT

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence

MAENREQPPG PPPSTSSSPL KSAAPPPPPP RPTITLPPRT SFETLFNSGG ANSGPGFGLG  60
FSPGPMTLVS SFLSDGDDCK SFSQLLAGAM SPAARPPGFP QLEDRSSGDG DDNSDFRFKH  120
NRPSPMFSVP SPGLLDSPRL FSPGQGPFGM THQQALAQVT AQAAQSSSYF HIPTEYSSSL  180
STAPTTSLTQ LPAFTSDSTA PQEMPSGAAD SGVAIKESSD ISHSDQRSQP SSFTVDKPND  240
DGYNWRKYGQ KQVKGSEFPR SYYKCTHSNC PVKKKVERSI DGQITEIIYK GEHNHERPQS  300
KRAKDSGNPI GNIQANPDLA SQVHGGHLNK SKKGQESSQA THDHLSGTSD GEEVGDAETR  360
VDEKDEDQPD PKRRNTEVRS EPASSHRTVT EPRIIVQTTS EVDLLDDGYR WRKYGQKVVK  420
GNPYPRSYYK CTFPACNVRK HVERASTDPK AVITTYEGKH NHDVPASKTG SHYAANNNAS  480
NIRAVDAGTE KINKMDLRNS DQQRVARLRL KEEQLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-143	WRKY family protein