PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000220.1_g1310.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 326aa    MW: 36767.3 Da    PI: 7.8829
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000220.1_g1310.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like57.62.7e-182154134
                     G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktile 34
                                kprl+WtpeLH+rFveav+qLGG++kAtPk++++
  Pav_sc0000220.1_g1310.1.mk 21 KPRLKWTPELHQRFVEAVNQLGGADKATPKSLMR 54
                                79*****************************997 PP
2Myb_DNA-binding36.88.9e-122362137
                                TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-H CS
             Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtl 37
                                r++WT+e+++++v+av+qlGg    t+k+ +r+  +g++ 
  Pav_sc0000220.1_g1310.1.mk 23 RLKWTPELHQRFVEAVNQLGGAdkaTPKSLMRKYRLGKSQ 62
                                89******************99***********9998875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MGLLQNMQNQ NMNLVLSTDA KPRLKWTPEL HQRFVEAVNQ LGGADKATPK SLMRKYRLGK  60
SQQSENCTDI KQEDYKEIQS SDDHFDTDIS DETHCQINES LQIAESLQLQ MEVQRKLHEQ  120
IEVQRHLQLR IEAQGKYLQT VLKKAQETLS GYSSSSVGVE LAKAELTQLV SMVNNGCTSS  180
SFSELTETGT SSLKYIERKQ MRGSMESSLT SSESSGRKEE KQPIHKHGGD PEKSNTTCVE  240
LPLMDIHPEN KPWNNVTNNH VIGRKRSSSP ISYGICVEQP ISKRTPTQRD KSGQHLRKSG  300
LLDLNRKYQN DIDSGPKVID LNCKGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.16e-70G2-like family protein