PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000201.1_g300.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ERF

Protein Properties

Length: 465aa MW: 50369.6 Da PI: 6.1834

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000201.1_g300.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	64.5	2.1e-20	234	283	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g Pav_sc0000201.1_g300.1.mk 234 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 283 7******.******7.....337***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MCLLKVANQR SSGGQYDRFE SSNDDDHGEK AYTYEEQLQA AAANIDHELM NQLPDQNVSP 60 TMFLGYSRPT EMSAMVSALT HVVSGQRGSD SWGHFGSGGV TSSFGQLYSS SSFASPSASP 120 LSAFSSTSGP SASGSHNWVG QKRGREEDLA AAASAQAQFM ESANRVYRGS YGDFRATTQA 180 ESSSGATVTE EATNSVTTTT TSTASAATAA SAVPSTPSSS ETVSFEEPVE RRRRYRGVRQ 240 RPWGKWAAEI RDPHKAARVW LGTFDTAEAA ARAYDEAALR FRGNRAKLNF PENVRLVHPQ 300 PQPPNLQNFN SDSAPTNLAP ILSTQPLQPP PQPPQQLYQP QPFHGSSDFL RDYFDYSQLL 360 QSSTDFHAQQ QQQQQHPTNL LQQMYYNSQL ASLQSSLLNP PSSSSSPSTL PSSASASASF 420 PLFFSDQNQQ LSFFRPPRNQ TNPGGSSDFP APSWSQSGNN PSSSG

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MCLLKVANQR SSGGQYDRFE SSNDDDHGEK AYTYEEQLQA AAANIDHELM NQLPDQNVSP  60
TMFLGYSRPT EMSAMVSALT HVVSGQRGSD SWGHFGSGGV TSSFGQLYSS SSFASPSASP  120
LSAFSSTSGP SASGSHNWVG QKRGREEDLA AAASAQAQFM ESANRVYRGS YGDFRATTQA  180
ESSSGATVTE EATNSVTTTT TSTASAATAA SAVPSTPSSS ETVSFEEPVE RRRRYRGVRQ  240
RPWGKWAAEI RDPHKAARVW LGTFDTAEAA ARAYDEAALR FRGNRAKLNF PENVRLVHPQ  300
PQPPNLQNFN SDSAPTNLAP ILSTQPLQPP PQPPQQLYQP QPFHGSSDFL RDYFDYSQLL  360
QSSTDFHAQQ QQQQQHPTNL LQQMYYNSQL ASLQSSLLNP PSSSSSPSTL PSSASASASF  420
PLFFSDQNQQ LSFFRPPRNQ TNPGGSSDFP APSWSQSGNN PSSSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	230	235	ERRRRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64750.1	1e-15	ERF family protein