PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000184.1_g710.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NF-YC | ||||||||
Protein Properties | Length: 192aa MW: 21911.5 Da PI: 7.1286 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 174.9 | 8.3e-55 | 49 | 152 | 1 | 101 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaa 81 ql+sfw++q ie + dfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaa Pav_sc0000184.1_g710.1.mk 49 QLQSFWAEQyqeIEAVMDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 132 89*****999899*********************************************************************** PP NF-YC 82 avtrtdifdflvdivprdel 101 a+trtdif+flvdivpr++l Pav_sc0000184.1_g710.1.mk 133 AITRTDIFNFLVDIVPREDL 152 *****************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MMVLSPTGSV GLMQSPTQPA GPPASSQLAQ HQLAYQHIHQ QQQQQLQQQL QSFWAEQYQE 60 IEAVMDFKNH SLPLARIKKI MKADEDVRMI SAEAPVIFAR ACEMFILELT LRSWNHTEEN 120 KRRTLQKNDI AAAITRTDIF NFLVDIVPRE DLKDEVLASI PRGGNLPIEV RLMVCLTITC 180 LLSMLHRLVL RV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 122 | 128 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08970.3 | 2e-71 | NF-YC family protein |