PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000157.1_g770.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NF-YB | ||||||||
Protein Properties | Length: 247aa MW: 25415.9 Da PI: 6.628 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 184.8 | 6.8e-58 | 59 | 154 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85 reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisfvt+easdkcqrekrktingddllwa++tlGfe+yveplkv Pav_sc0000157.1_g770.1.mk 59 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKV 142 89********************************************************************************** PP NF-YB 86 ylkkyrelegek 97 yl+k+re+egek Pav_sc0000157.1_g770.1.mk 143 YLQKFREVEGEK 154 **********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
CIINPPDPTD PNTSASPPAS LSDAVHPRRP RPPIMADSDN DSGGNNDGSH AQSGELSARE 60 QDRFLPIANV SRIMKKALPA NAKISKDAKE TVQECVSEFI SFVTGEASDK CQREKRKTIN 120 GDDLLWAMTT LGFEEYVEPL KVYLQKFREV EGEKTTMGGR DKDSAGGGGG GASGGGVSSG 180 SSGGGGGYNG VYGGMVMMGN HHHNQGHVYG SGGGYQQHQM GMGSGGVRVG NSGGSGSGGN 240 GGASVVR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14540.1 | 6e-72 | NF-YB family protein |