PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000146.1_g170.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 323aa    MW: 36282.8 Da    PI: 4.5099
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000146.1_g170.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.94.8e-05204246754
                                HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                        HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                  +r RR ri ++++ LrellP +     +    + ++  ++++Ik L
  Pav_sc0000146.1_g170.1.mk 204 LTDRSRRMRIAERLDALRELLPIS-----TEGGQSFVVDDVIDHIKFL 246
                                5689******************87.....2223345555555555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MEGQSSLTDP MQLVPLDFCG DAAIDVSQAT GDDPSQQVSM ATEGTAYQTD DLFSPWWTEK  60
PKPSLNSLNC VEFLAESSTF LPKDPCEDIL ESIPLSVSGT DDVGGVSEFQ RHVLYSSLGN  120
ACGSKLTDFS MDMDDWKVRC LRPVNDELVN AQHQFHDKYH TSRTDNLYGD KKDGVSQVDP  180
RARSALPDFH SQPHRHISTQ RAALTDRSRR MRIAERLDAL RELLPISTEG GQSFVVDDVI  240
DHIKFLQLQI KDLCRSRLGG ETITEPIIFR EGYGHYFCHQ KMLNEPLEEM MGKLLETNPM  300
AASQLLENKD LLLLPMDYSE PLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.17e-18bHLH family protein