PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000143.1_g290.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 203aa    MW: 21827.3 Da    PI: 10.8046
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000143.1_g290.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-1859108255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f tae+Aa+a+++a+  l+g
  Pav_sc0000143.1_g290.1.mk  59 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFATAEDAARAYDRAAIILYG 108
                                59****999.**********954...5**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MEDEHPLSPP AAPPHHPPQD NDNNNKSPDS TTASTATTPT ETNNKKCKGK GGPDNNKFRY  60
RGVRQRSWGK WVAEIREPRK RTRKWLGTFA TAEDAARAYD RAAIILYGSR AQLNLQPSGS  120
NSQSSTRGSS SSSSSCNSST QTLRPLLPRP SGFGLTLPFP SSAHPVPLMA SGFVPYGVGV  180
GVYPSVAAAA TSSVQLSRFL FVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.11e-31ERF family protein