PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000119.1_g140.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 139aa    MW: 15429 Da    PI: 7.5995
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000119.1_g140.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.7e-191767255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                               +y+GVr ++ +g+++AeIrd    + + +r++lg+f taeeAa+a+++a+ +++g
  Pav_sc0000119.1_g140.1.mk 17 RYRGVRKRP-WGKYAAEIRDS---NrHGARVWLGTFNTAEEAARAYDRAAYAMRG 67
                               6********.**********4...3234*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MDSRGKVMEE KEGGEVRYRG VRKRPWGKYA AEIRDSNRHG ARVWLGTFNT AEEAARAYDR  60
AAYAMRGGLA ILNFPNEYPS ASGGSSSSSS SANFPSSVAG TTQERGRGEH GNEVLELEYL  120
DDKLLEELLD CDHQKKNKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.12e-24ERF family protein