PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000108.1_g100.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 270aa    MW: 30763.4 Da    PI: 10.5618
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000108.1_g100.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like93.61.6e-29215265252
                    G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 
                                pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+
  Pav_sc0000108.1_g100.1.mk 215 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM 265
                                9*************************************************8 PP
2Myb_DNA-binding46.11.1e-14216265146
                                TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHH CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqk 46 
                                r+rWTt ++ ++v+av++lGg+   t+k++ + m  k +tl ++ks++q+
  Pav_sc0000108.1_g100.1.mk 216 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQM 265
                                89**********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MELFPAQPDL SLQISPPNSK PTSSSSWRRS SREEQEEVDL GFWRRALDSR TSFSSSMAKP  60
DTGYELELSN PRVYAHGLHH HHHQHHQSNI SSNHIIHHHN QNGNVFQGFE QNQFSVPQVN  120
HHPLLNVHDQ QFQLQSQSQS DHLGFLRPIR GIPVYQNPPP PNLFPFSSQK PLDSNSCTST  180
STITSSSGPL FQAQGGLLRS RFLSRFPAKR SMRAPRMRWT TTLHARFVHA VELLGGHERA  240
TPKSVLELMD VKDLTLAHVK SHLQMRLRNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.11e-38G2-like family protein