PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000107.1_g480.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 239aa MW: 26883.3 Da PI: 5.2329 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.8 | 2.6e-18 | 59 | 110 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +++Wv+e+r+p + k+ r++lg++ tae+Aa+a++ a+++++g Pav_sc0000107.1_g480.1.br 59 PVYRGVRRRN-NNKWVCELREP---NkKKSRVWLGTYPTAEMAARAHDVAALAFRG 110 68*****887.8******9998...5477************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MNMFSAQLSD SPDQPESSSF SDASVTTLPA SSSDENVILA SSRPKKRAGR RVFKETRHPV 60 YRGVRRRNNN KWVCELREPN KKKSRVWLGT YPTAEMAARA HDVAALAFRG KLACINFADS 120 AWRLPVPASM DTMDIRRAAA EAAEGFRPAE FGGFSRGSSD EKEINVVMEE KKKNFSVDME 180 ISSSLSLFYL DEEEMFDMPR LIDNMAEGLL LSPPQCLAGY LSWDDMETEA DPKLWSFSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25490.1 | 5e-61 | ERF family protein |