PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000107.1_g470.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 237aa    MW: 26506.3 Da    PI: 7.2953
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000107.1_g470.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.71.1e-1655106155
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                                + y+GVr++  +++Wv+e+r p   + k+  ++lg++ tae+Aa+a++ a+++++g
  Pav_sc0000107.1_g470.1.br  55 PVYRGVRRRD-NNKWVCELRQP---NkKKSGIWLGTYPTAEMAARAHDVAALAFKG 106
                                68*****998.8******9998...5477**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MDMIFAQLSD SADQPKSSSL SDASVTTLRT SDVILASSRP KKRAGRKVFK ETRHPVYRGV  60
RRRDNNKWVC ELRQPNKKKS GIWLGTYPTA EMAARAHDVA ALAFKGKLAC LNFADSGWRL  120
PVAASMDAMD IQRAAAEAAE GFRPVEFGGV SSDSSDEKER MVVVEEKKKK QAIVDMGKSC  180
SRLNLFYLDE EEMFDMPRLI DNMAEGLLLS PPQCLAGYLN WDDMETEADP KLWSFSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.15e-61ERF family protein