PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000095.1_g500.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 504aa MW: 56244.8 Da PI: 4.5193

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000095.1_g500.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.1	9.1e-36	21	112	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhks 85 Fl+k+y++++d++++ ++sws+ +nsfvv++ ef++++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ Pav_sc0000095.1_g500.1.mk 21 FLNKTYDMVDDPSTNAVVSWSNGNNSFVVWNVPEFSRDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEG 95 9**************************************************************999.........*** PP XXXXXXXXXXXXXXXXX CS HSF_DNA-bind 86 Fkkgkkellekikrkks 102 F +g+k+ll+++ r+k Pav_sc0000095.1_g500.1.mk 96 FLRGQKHLLKTVSRRKP 112 ************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MEGVEDAPTM INLANTPPPP FLNKTYDMVD DPSTNAVVSW SNGNNSFVVW NVPEFSRDLL 60 PKYFKHNNFS SFVRQLNTYG FRKVDPDRWE FANEGFLRGQ KHLLKTVSRR KPAHANSHQQ 120 APPQVQSSQV GACVEVGNLG LEEEVERLKN DKNSLMQELV RLRQKQQATD NQLHNVGQRV 180 QGMEQRQQQM MSFLAKAMHS PGFLSQLVQH QNENNRRITG SNKKRRLPRQ EDEILVGKLS 240 TKSLDGQMVK YQPSMNEAAK AMLRQILKMN TSPRLEPSMI NPDAFLIDNV PSSDALESGD 300 TSNRILGVTF SEVPPTSEEC YMPEEESGFP DSCHSTAISE IQCSPYAVTN CVKAAQVLEE 360 NMHNFQEDAV MPESTQMQGG VPESTVEIPN ANFMSSETGN AEYMDMSAVL DGTLPTETDA 420 FSPEPDVDAL LGSNLPGITD IFWEQFLPAS PLTGDVDEIN LSSTDGGTMD QELKFGEENG 480 WDKTQHMNHI TEQMELLAPG SRIG

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MEGVEDAPTM INLANTPPPP FLNKTYDMVD DPSTNAVVSW SNGNNSFVVW NVPEFSRDLL  60
PKYFKHNNFS SFVRQLNTYG FRKVDPDRWE FANEGFLRGQ KHLLKTVSRR KPAHANSHQQ  120
APPQVQSSQV GACVEVGNLG LEEEVERLKN DKNSLMQELV RLRQKQQATD NQLHNVGQRV  180
QGMEQRQQQM MSFLAKAMHS PGFLSQLVQH QNENNRRITG SNKKRRLPRQ EDEILVGKLS  240
TKSLDGQMVK YQPSMNEAAK AMLRQILKMN TSPRLEPSMI NPDAFLIDNV PSSDALESGD  300
TSNRILGVTF SEVPPTSEEC YMPEEESGFP DSCHSTAISE IQCSPYAVTN CVKAAQVLEE  360
NMHNFQEDAV MPESTQMQGG VPESTVEIPN ANFMSSETGN AEYMDMSAVL DGTLPTETDA  420
FSPEPDVDAL LGSNLPGITD IFWEQFLPAS PLTGDVDEIN LSSTDGGTMD QELKFGEENG  480
WDKTQHMNHI TEQMELLAPG SRIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	1e-130	HSF family protein