PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000095.1_g440.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 324aa    MW: 36606.5 Da    PI: 8.2642
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000095.1_g440.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1676.4e-52111351129
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk 84 
                                lppGfrFhP+deelv++yL kkv++++ +l   + evd++k+ePwd+p+++  ++kewyf+s+rd+kyatg r+nrat++gyWk
  Pav_sc0000095.1_g440.1.mk  11 LPPGFRFHPRDEELVCDYLLKKVTQTDSTL---MIEVDLNKCEPWDIPETACVGRKEWYFYSQRDRKYATGLRTNRATATGYWK 91 
                                79***********************99666...889************77777999**************************** PP

                        NAM  85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                                atgkd+++l+ kg+lvg++ktLvfy+grapkg+k+dWvmhe+rle
  Pav_sc0000095.1_g440.1.mk  92 ATGKDRPILR-KGSLVGMRKTLVFYQGRAPKGRKSDWVMHEFRLE 135
                                *********9.999****************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MSNISMVEAK LPPGFRFHPR DEELVCDYLL KKVTQTDSTL MIEVDLNKCE PWDIPETACV  60
GRKEWYFYSQ RDRKYATGLR TNRATATGYW KATGKDRPIL RKGSLVGMRK TLVFYQGRAP  120
KGRKSDWVMH EFRLEGPFAP PKISSHREDW VLCRVFYKNR EIVAKPSMGI SCYDDTSNSS  180
LPALMDSYIS FDGQPQPQPQ LQPQPHHEYE QVPCFSIFSQ SQTSPIFSHI DITGAHLEPN  240
MPTKNNNNNP ATFGGLPNAT SFLDPFSCDK KVLKAVLSQL TKMEETSSYP TSNLKGSSPP  300
SLGAGSSSEN YLSEVGMPNI WSHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.21e-115NAC family protein