PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000091.1_g140.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SBP

Protein Properties

Length: 316aa MW: 34624.9 Da PI: 9.7528

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000091.1_g140.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.3	1.7e-41	41	117	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC++dlse+++yhrrhkvCe hsk+++v+++g+eqrfCqqCsrfh+l+efDe+krsCrrrLa+hn+rrrk+q Pav_sc0000091.1_g140.1.mk 41 CLVDGCNSDLSECRDYHRRHKVCELHSKTSKVTIKGQEQRFCQQCSRFHSLEEFDEGKRSCRRRLAGHNKRRRKPQL 117 **************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MEKGSKGKLK DPGVSIMKSS SSAASLKRPR RTNNGAQIAS CLVDGCNSDL SECRDYHRRH 60 KVCELHSKTS KVTIKGQEQR FCQQCSRFHS LEEFDEGKRS CRRRLAGHNK RRRKPQLEPM 120 STNLGRFLSS YQDTRFLQFG SPQVCPTNAV MNSAWGGAMK AENDDVLLHS HSQLSETRRN 180 LFPGSLACQQ SIESMLSQAS ACQQLVGTDF ALGNSGNSHK MFAKGLYRDV ESNRALSLLS 240 STPASRGEIG LSHTGQSSSI WPAQPLIPRL RYNVLGMVDE AAISNSVADG SSNANNMHFQ 300 GMFQIISDGS TAGAPH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	115	KRSCRRRLAGHNKRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	8e-51	SBP family protein